Version: cisCall v7.2.0-p-rc4

About

cisCall is a variant caller specialized for identifying DNA alterations of FFPE samples in clinical sequencing.

cisCall7 is the latest version of cisCall developed as a command-line tool, and contains the following variant caller modules:

  • cisMuton
    • caller for SNVs/indels
  • cisCton
    • caller for copy number alterations
  • cisFusion
    • caller for fusion genes

Changelog

  • 2018-10-05:
    • v7.2.0-p-rc4 released
      • Improve algorithms and parameters of false positive SNV/Indel filters (Surrounded and VAFlees)
      • Deprecate --free-memory-rate
      • Fix bugs

Download

Send a request to download cisCall7 from the form at the following page:

Getting started

Documents

Contact

E-mail: contact@ciscall.org